PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr2P14390_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 174aa    MW: 19949.2 Da    PI: 9.8552
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr2P14390_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.84e-081665654
                           HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
                    HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                           + +E+ RR ++++ + +L +++P   ++++k  ++K + L +A  YIk+L
  GSMUA_Achr2P14390_001 16 KLAEKYRRLHMKTLYLKLSSIIPAEHRTTAKDiMTKQDNLDQAASYIKYL 65
                           679*********************555555555****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.41E-9876IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.7431065IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.6E-81475IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.2E-51665IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MRNCHGGRAD LKLERKLAEK YRRLHMKTLY LKLSSIIPAE HRTTAKDIMT KQDNLDQAAS  60
YIKYLGERIE KLKQRRLVQT SAARNEMGTG YLLPIIEVKY QDLNLEILLI SGVNKSFMFH  120
EVINVLEEEG AEVIHASFSV VGDKIYHTIH SQAVSTRIGL EASRVSERLK ELVK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009388820.11e-125PREDICTED: uncharacterized protein LOC103975547
TrEMBLM0S7Y01e-125M0S7Y0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P14390_0011e-125(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82936133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.14e-26bHLH family protein